This supplementary material discusses the details of implementation including hyperparameters, network configuration, and the framework protocol in Sec. A. It details the data-centralized and other distributed learning strategies used for

Infectious diseases occur when pathogens from other individuals or animals infect a person, resulting in harm to both individuals and society as a whole. The outbreak of such diseases can pose a significant threat to human health. However, early detection and tracking of these outbreaks have the potential to reduce the mortality impact. To address these threats, public health authorities have endeavored to establish comprehensive mechanisms for collecting disease data. Many countries have implemented infectious disease surveillance systems, with the detection of epidemics being a primary objective. The clinical healthcare system, local/state health agencies, federal agencies, academic/professional groups, and collaborating governmental entities all play pivotal roles within this system. Moreover, nowadays, search engines and social media platforms can serve as valuable tools for monitoring disease trends. The Internet and social media have become significant platforms where users share information about their preferences and relationships. This real-time information can be harnessed to gauge the influence of ideas and societal opinions, making it highly useful across various domains and research areas, such as marketing campaigns, financial predictions, and public health, among others. This article provides a review of the existing standard methods developed by researchers for detecting outbreaks using time series data. These methods leverage various data sources, including conventional data sources and social media data or Internet data sources. The review particularly concentrates on works published within the timeframe of 2015 to 2022.

The COVID-19 pandemic has exacerbated xenophobia, particularly Sinophobia, leading to widespread discrimination against individuals of Chinese descent. Large language models (LLMs) are pre-trained deep learning models used for natural language processing (NLP) tasks. The ability of LLMs to understand and generate human-like text makes them particularly useful for analysing social media data to detect and evaluate sentiments. We present a sentiment analysis framework utilising LLMs for longitudinal sentiment analysis of the Sinophobic sentiments expressed in X (Twitter) during the COVID-19 pandemic. The results show a significant correlation between the spikes in Sinophobic tweets, Sinophobic sentiments and surges in COVID-19 cases, revealing that the evolution of the pandemic influenced public sentiment and the prevalence of Sinophobic discourse. Furthermore, the sentiment analysis revealed a predominant presence of negative sentiments, such as annoyance and denial, which underscores the impact of political narratives and misinformation shaping public opinion. The lack of empathetic sentiment which was present in previous studies related to COVID-19 highlights the way the political narratives in media viewed the pandemic and how it blamed the Chinese community. Our study highlights the importance of transparent communication in mitigating xenophobic sentiments during global crises.

The worldwide impact of the recent COVID-19 pandemic has been substantial, necessitating the development of accurate forecasting models to predict the spread and course of a pandemic. Previous methods for outbreak forecasting have faced limitations by not utilizing multiple sources of input and yielding suboptimal performance due to the limited availability of data. In this study, we propose a novel approach to address the challenges of infectious disease forecasting. We introduce a Multilateral Attention-enhanced GRU model that leverages information from multiple sources, thus enabling a comprehensive analysis of factors influencing the spread of a pandemic. By incorporating attention mechanisms within a GRU framework, our model can effectively capture complex relationships and temporal dependencies in the data, leading to improved forecasting performance. Further, we have curated a well-structured multi-source dataset for the recent COVID-19 pandemic that the research community can utilize as a great resource to conduct experiments and analysis on time-series forecasting. We evaluated the proposed model on our COVID-19 dataset and reported the output in terms of RMSE and MAE. The experimental results provide evidence that our proposed model surpasses existing techniques in terms of performance. We also performed performance gain and qualitative analysis on our dataset to evaluate the impact of the attention mechanism and show that the proposed model closely follows the trajectory of the pandemic.

COVID-19 forecasting models have been used to inform decision making around resource allocation and intervention decisions e.g., hospital beds or stay-at-home orders. State of the art deep learning models often use multimodal data such as mobility or socio-demographic data to enhance COVID-19 case prediction models. Nevertheless, related work has revealed under-reporting bias in COVID-19 cases as well as sampling bias in mobility data for certain minority racial and ethnic groups, which could in turn affect the fairness of the COVID-19 predictions along race labels. In this paper, we show that state of the art deep learning models output mean prediction errors that are significantly different across racial and ethnic groups; and which could, in turn, support unfair policy decisions. We also propose a novel de-biasing method, DemOpts, to increase the fairness of deep learning based forecasting models trained on potentially biased datasets. Our results show that DemOpts can achieve better error parity that other state of the art de-biasing approaches, thus effectively reducing the differences in the mean error distributions across more racial and ethnic groups.

Interpreting deep learning time series models is crucial in understanding the model's behavior and learning patterns from raw data for real-time decision-making. However, the complexity inherent in transformer-based time series models poses challenges in explaining the impact of individual features on predictions. In this study, we leverage recent local interpretation methods to interpret state-of-the-art time series models. To use real-world datasets, we collected three years of daily case data for 3,142 US counties. Firstly, we compare six transformer-based models and choose the best prediction model for COVID-19 infection. Using 13 input features from the last two weeks, we can predict the cases for the next two weeks. Secondly, we present an innovative way to evaluate the prediction sensitivity to 8 population age groups over highly dynamic multivariate infection data. Thirdly, we compare our proposed perturbation-based interpretation method with related work, including a total of eight local interpretation methods. Finally, we apply our framework to traffic and electricity datasets, demonstrating that our approach is generic and can be applied to other time-series domains.

Severe acute respiratory disease SARS-CoV-2 has had a profound impact on public health systems and healthcare emergency response especially with respect to making decisions on the most effective measures to be taken at any given time. As demonstrated throughout the last three years with COVID-19, the prediction of the number of positive cases can be an effective way to facilitate decision-making. However, the limited availability of data and the highly dynamic and uncertain nature of the virus transmissibility makes this task very challenging. Aiming at investigating these challenges and in order to address this problem, this work studies data-driven (learning, statistical) methods for incrementally training models to adapt to these nonstationary conditions. An extensive empirical study is conducted to examine various characteristics, such as, performance analysis on a per virus wave basis, feature extraction, "lookback" window size, memory size, all for next-, 7-, and 14-day forecasting tasks. We demonstrate that the incremental learning framework can successfully address the aforementioned challenges and perform well during outbreaks, providing accurate predictions.